Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs35327455 chr10:88766218 T/C 3.24E-5 168 20.33 21.6 22.63 KM Plot
UCEC rs35372754 chr14:22309386 A/C 8.49E-5 171 22.72 20.17 10.93 KM Plot
UCEC rs35449350 chr4:57279180 T/TCA 0.000133 174 33.28 22.7 19.17 KM Plot
UCEC rs35451245 chr15:75375831 A/ATTT 5.5E-5 168 26.6 20.68 12.65 KM Plot
UCEC rs35511801 chr22:50229805 TAC/T 3.09E-6 170 23.27 19.63 14.4 KM Plot
UCEC rs35775409 chr5:77680510 C/CT 6.87E-5 170 22.08 24.97 16.3 KM Plot
UCEC rs362350 chr14:73631092 A/G 4.44E-7 174 22.57 27.05 10.33 KM Plot
UCEC rs362369 chr14:73670285 C/T 4.61E-7 173 22.57 31.47 10.33 KM Plot
UCEC rs362424 chr14:73569343 C/T 4.68E-7 173 22.57 22.63 10.33 KM Plot
UCEC rs367729906 chr16:30831753 CAT/C 1.13E-8 169 4.5 18.03 23.18 KM Plot
UCEC rs370356971 chr16:30831775 T/C 1.13E-8 169 4.5 18.03 23.18 KM Plot
UCEC rs373696 chr6:5124416 A/G 1.26E-5 174 13.37 25.45 22.57 KM Plot
UCEC rs373718411 chr9:832597 CA/C 1.68E-8 166 22.8 20.07 4.5 KM Plot
UCEC rs373945928 chr3:47920730 GA/G 7.42E-6 170 22.7 20.13 11.53 KM Plot
UCEC rs3742823 chr14:73705699 C/T 4.61E-7 174 22.57 27.05 10.33 KM Plot